Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Bisulfite-Seq
Antigen
Bisulfite-Seq

Cell type

Cell type Class
Gonad
Cell type
Germinal vesicle oocytes
NA
NA

Attributes by original data submitter

Sample

sample_name
DRS001153
age
7 to 8 weeks
sex
female
sample comment
Fully grown germinal vesicle (GV) stage oocytes were collected from ovarian follicles of 7- to 8-week-old female C57BL/6N mice (Clea Japan, Tokyo, Japan) by 48-hour after the injection of pregnant mare serum gonadotropin.

Sequenced DNA Library

library_name
101018_03
library_strategy
Bisulfite-Seq
library_source
GENOMIC
library_selection
RANDOM

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
105485022
Reads aligned (%)
81.8
Coverage rate (×)
1.2
Number of hyper MRs
128528 (qval < 1E-05)

mm9

Number of total reads
105485022
Reads aligned (%)
81.8
Coverage rate (×)
1.2
Number of hyper MRs
128350 (qval < 1E-05)

Base call quality data from DBCLS SRA