DRX001063
C2C12miRChd2 D H3.3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3.3

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

sample_name
DRS001045
sample comment
C2C12 differentiated cells 0.5%formaldehyde 5min fixation

Sequenced DNA Library

library_name
C2C12miRChd2_D_H3.3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
21189643
Reads aligned (%)
93.1
Duplicates removed (%)
44.8
Number of peaks
626 (qval < 1E-05)

mm9

Number of total reads
21189643
Reads aligned (%)
92.4
Duplicates removed (%)
44.7
Number of peaks
723 (qval < 1E-05)

Base call quality data from DBCLS SRA