DRX000747
Ramos IL4 IgM ChIP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Burkitt lymphoma cells
NA
NA

Attributes by original data submitter

Sample

sample_name
DRS000713
sample comment
source: Human Burkitt's lymphoma cells stimulated with IgM and IL4; description: chip-seq library, immunoprecipitated sample.

Sequenced DNA Library

library_name
Ramos_IL4_IgM_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24939261
Reads aligned (%)
83.7
Duplicates removed (%)
55.0
Number of peaks
767 (qval < 1E-05)

hg19

Number of total reads
24939261
Reads aligned (%)
83.2
Duplicates removed (%)
55.9
Number of peaks
876 (qval < 1E-05)

Base call quality data from DBCLS SRA