DRX000745
Ramos IL4 IgM WCE

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Burkitt lymphoma cells
NA
NA

Attributes by original data submitter

Sample

sample_name
DRS000711
sample comment
source: Human Burkitt's lymphoma cells stimulated with IgM and IL-4; description: chip-seq library, whole cell extract.

Sequenced DNA Library

library_name
Ramos_IL4_IgM_WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
31274894
Reads aligned (%)
83.5
Duplicates removed (%)
25.4
Number of peaks
490 (qval < 1E-05)

hg19

Number of total reads
31274894
Reads aligned (%)
83.0
Duplicates removed (%)
25.9
Number of peaks
594 (qval < 1E-05)

Base call quality data from DBCLS SRA