DRX000744
Ramos IgM WCE

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Burkitt lymphoma cells
NA
NA

Attributes by original data submitter

Sample

sample_name
DRS000710
sample comment
source: Human Burkitt's lymphoma cells stimulated with IgM and non-stimulated with IL-4; description: chip-seq library, whole cell extract.

Sequenced DNA Library

library_name
Ramos_IgM_WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
33590293
Reads aligned (%)
84.4
Duplicates removed (%)
26.5
Number of peaks
471 (qval < 1E-05)

hg19

Number of total reads
33590293
Reads aligned (%)
83.9
Duplicates removed (%)
27.1
Number of peaks
594 (qval < 1E-05)

Base call quality data from DBCLS SRA