Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Hmr

Cell type

Cell type Class
Larvae
Cell type
L2-4
NA
NA

Attributes by original data submitter

Sample

source_name
whole cell
cell line
L2-4
treatment
GST RNAi
ChIP
HMR (Thomae et al, 2013)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
24601095
Reads aligned (%)
95.5
Duplicates removed (%)
17.2
Number of peaks
7168 (qval < 1E-05)

dm6

Number of total reads
24601095
Reads aligned (%)
95.2
Duplicates removed (%)
20.4
Number of peaks
6151 (qval < 1E-05)

Base call quality data from DBCLS SRA