Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
dre4

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
treatment
Spt16 dsRNA
antibody
Spt16 (Custom made)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
40053952
Reads aligned (%)
96.7
Duplicates removed (%)
12.4
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
40053952
Reads aligned (%)
96.5
Duplicates removed (%)
14.3
Number of peaks
3137 (qval < 1E-05)

Base call quality data from DBCLS SRA