Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ubx

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2-HA::Ubx Cell line
cell line
late embryo-derived cell line stably transfected with HA::Ubx
strain
S2-DRSC-HA::Ubx
genotype
HA::Ubx
treatment
10 microMolar Cu2SO4
chip antibody
HA (AbCam ab9110)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
50285491
Reads aligned (%)
88.6
Duplicates removed (%)
34.6
Number of peaks
16786 (qval < 1E-05)

dm6

Number of total reads
50285491
Reads aligned (%)
88.3
Duplicates removed (%)
36.3
Number of peaks
16135 (qval < 1E-05)

Base call quality data from DBCLS SRA