Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
sc

Cell type

Cell type Class
Embryo
Cell type
0-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-12
strain
iso1 (y; bw cn sp)
developmental stage
E0-12
antibody name
sc
manufacturer
White Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM847656: sc_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
33939654
Reads aligned (%)
94.0
Duplicates removed (%)
31.7
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
33939654
Reads aligned (%)
93.5
Duplicates removed (%)
33.8
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA