Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
exd

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24h_13T
developmental stage
E16-24h_13T
antibody name
exd-GFP
fly type
transgenic
manufacturer
Irvine Lab
catalog
N/A

Sequenced DNA Library

library_name
GSM669541: E16-24h_13T_exd-GFP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
35844733
Reads aligned (%)
96.4
Duplicates removed (%)
25.2
Number of peaks
10600 (qval < 1E-05)

dm6

Number of total reads
35844733
Reads aligned (%)
95.3
Duplicates removed (%)
29.1
Number of peaks
11252 (qval < 1E-05)

Base call quality data from DBCLS SRA