Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CG8478

Cell type

Cell type Class
Embryo
Cell type
16-24h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E16-24h
developmental stage
E16-24h
antibody name
CG8478
manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM614655: CG8478_E16-24h_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
50331565
Reads aligned (%)
94.2
Duplicates removed (%)
80.9
Number of peaks
3500 (qval < 1E-05)

dm6

Number of total reads
50331565
Reads aligned (%)
93.5
Duplicates removed (%)
84.7
Number of peaks
3647 (qval < 1E-05)

Base call quality data from DBCLS SRA