ChIP-Atlas

An integrative, comprehensive database to explore public Epigenetic dataset, including ChIP-Seq, DNase-Seq, ATAC-Seq, and Bisulfite-Seq data: ChIP-Atlas covers almost all public data archived in Sequence Read Archive of NCBI, EBI, and DDBJ with over 324,000 experiments.

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What's new

  • New publication on the NAR web server issue! https://doi.org/10.1093/nar/gkac199 (2022/03/24)
  • Added ATAC-Seq and Bisulfite-Seq , together with UI improvement including 'peak' icon! (2021/10/04)

Peak Browser

Visualizes protein binding on given genomic loci with IGV genome browser

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Target Genes

Predict target genes bound by given transcription factors

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Colocalization

Predict partner proteins colocalizing with given transcription factors

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Enrichment Analysis

Predict proteins bound to given genomic loci and genes

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