ChIP-Atlas

A data-mining suite for exploring epigenomic landscapes by fully integrating 472,000 ChIP-seq, ATAC-seq and Bisulfite-seq experiments.

Peak Browser

ChIP ATAC Bisulfite

Enrichment Analysis

ChIP ATAC Bisulfite

Diff Analysis

ChIP ATAC Bisulfite

Target Genes

ChIP

Colocalization

ChIP

Dataset Search

ChIP ATAC Bisulfite

What's new

  • Added new genome assembly TAIR12 of A. thaliana, welcome! (2026/09/26)
  • ChIP-Atlas turns 10! New publication in the NAR Web Server Issue. Happy to have supported so many researchers over the past decade! https://doi.org/10.1093/nar/gkag378 (2026/04/29)
  • New publication on the NAR web server issue! https://doi.org/10.1093/nar/gkae358 (2024/05/16)
  • Added Annotation tracks to Peak Browser, together with UI improvement (2023/10/25)
  • Launched Diff Analysis tool enabling to detect differential peaks or differentially methylated regions (2023/10/25)
  • New publication on the NAR web server issue! https://doi.org/10.1093/nar/gkac199 (2022/03/24)
  • Added ATAC-Seq and Bisulfite-Seq , together with UI improvement including 'peak' icon! (2021/10/04)