Antigen

Antigen Class

TFs and others

Antigen

KDM4C

Cell type

Cell type Class

Others

Cell type

OECM-1

NA

NA

Sample

source_name

Head and neck cancer cell line OECM1 receving Cas9-ctrl

cell line

OECM1

cell type

Head and neck cancer cell

chip antibody

KDM4C

chip antibody vendor

NOVUS

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified by the Pierce Magnetic ChIP Kit and histone-DNA complexes were isolated with antibody. 10 ng DNA was end-repaired, A-tailed and adaptor-ligated following the Illumina's TruSeq DNA preparation protocol.

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

26602999

Reads aligned (%)

99.3

Duplicates removed (%)

18.9

Number of peaks

627 (qval < 1E-05)

hg19

Number of total reads

26602999

Reads aligned (%)

98.7

Duplicates removed (%)

20.5

Number of peaks

516 (qval < 1E-05)