Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
chipseq antibody
rabbit anti MYST5 (1)
technique
Shearing technique: Bioruptor
cell line
S2

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP of MYST5 from Schneider cells (SL2, S2) was performed as described in Wu CH et al, Genes Dev 17: 1402 (2003). ChIP samples from two independent MYST5 antibodies and input samples were prepared using the NEXTflex ChIP-Seq Kit.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
38537934
Reads aligned (%)
68.9
Duplicates removed (%)
76.5
Number of peaks
5635 (qval < 1E-05)

dm3

Number of total reads
38537934
Reads aligned (%)
69.3
Duplicates removed (%)
74.4
Number of peaks
6981 (qval < 1E-05)

Base call quality data from DBCLS SRA