Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Pancreas

Cell type

Pancreas

MeSH Description

A nodular organ in the ABDOMEN that contains a mixture of ENDOCRINE GLANDS and EXOCRINE GLANDS. The small endocrine portion consists of the ISLETS OF LANGERHANS secreting a number of hormones into the blood stream. The large exocrine portion (EXOCRINE PANCREAS) is a compound acinar gland that secretes several digestive enzymes into the pancreatic ductal system that empties into the DUODENUM.

Sample

source_name

pancreas, juvenile, H3K27ac ChIP

cell type

endocrine

age

juvenile

chip antibody

rabbit H3K27ac (Abcam, ab4729)

tissue

pancreas

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Nextera Tagmentation (Buenrostro et al 2013. PMID:24097267) Illumina HiSeq/TruSeq

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

37751777

Reads aligned (%)

85.7

Duplicates removed (%)

32.2

Number of peaks

36101 (qval < 1E-05)

hg19

Number of total reads

37751777

Reads aligned (%)

85.6

Duplicates removed (%)

32.2

Number of peaks

36010 (qval < 1E-05)