Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HAP1

Cell type

Cell type Class
Blood
Cell type
KBM-7
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
HAP1
cell type
KBM7-derived near haploid cells

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
46192365
Reads aligned (%)
86.2
Duplicates removed (%)
11.8
Number of peaks
46662 (qval < 1E-05)

hg38

Number of total reads
46192365
Reads aligned (%)
87.7
Duplicates removed (%)
10.8
Number of peaks
46990 (qval < 1E-05)

Base call quality data from DBCLS SRA