Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
Jurkat cell line: Human T lymphocyte
cell line
Jurkat
cell type
T lymphocyte
pre-treatment
None
antibody
H3K27ac (ab4729, Abcam).

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Magna ChIP™ A/G Chromatin Immunoprecipitation Kit (Merck Millipore).

Sequencing Platform

instrument_model
Illumina MiSeq

hg38

Number of total reads
59149451
Reads aligned (%)
68.4
Duplicates removed (%)
9.3
Number of peaks
29673 (qval < 1E-05)

hg19

Number of total reads
59149451
Reads aligned (%)
67.4
Duplicates removed (%)
11.2
Number of peaks
29292 (qval < 1E-05)

Base call quality data from DBCLS SRA