Antigen

Antigen Class

TFs and others

Antigen

FOXA2

Cell type

Cell type Class

Prostate

Cell type

LNCAP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

LNCaP

cell type

prostate cancer cell

antibody

FOXA2

cell line

LNCaP

agent

vehicle

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Libraries construction was performed using ThruPLEX DNA-seq 48D Kit (Rubicon Genomics)

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

13049492

Reads aligned (%)

94.0

Duplicates removed (%)

3.6

Number of peaks

52326 (qval < 1E-05)

hg19

Number of total reads

13049492

Reads aligned (%)

93.5

Duplicates removed (%)

4.0

Number of peaks

52181 (qval < 1E-05)