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Install and launch IGV before selecting data to visualize
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For ce11
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For ce10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K27me3
wikigenes
PDBj
CellType: Whole worm
ATCC
MeSH
RIKEN BRC
SRX7971807
GSM4430047: ChIP-seq glp-4; oef-1 H3K27me3 rep 2; Caenorhabditis elegans; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K27me3
Cell type
Cell type Class
Adult
Cell type
Whole worm
NA
NA
Attributes by original data submitter
Sample
source_name
Staged young adults from glp-4(bn2); oef-1(vr25) strain
Stage
Young adult
tissue
Whole animal
antibody
H3K27me3
strain
YL679
genotype
glp-4(bn2); oef-1(vr25)
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
ce11
Number of total reads
28017931
Reads aligned (%)
97.5
Duplicates removed (%)
20.4
Number of peaks
988 (qval < 1E-05)
ce10
Number of total reads
28017931
Reads aligned (%)
97.5
Duplicates removed (%)
20.4
Number of peaks
987 (qval < 1E-05)
Base call quality data from
DBCLS SRA