SRX793524
Whole Limb E11.5 H3K27ac

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryonic limb
NA
NA

Attributes by original data submitter

Sample

breed
CD1
dev_stage
E11.5
sex
pooled male and female
tissue
limbs

Sequenced DNA Library

library_name
Whole_Limb_K27ac.fastq.gz
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
280036210
Reads aligned (%)
98.1
Duplicates removed (%)
39.0
Number of peaks
19615 (qval < 1E-05)

mm9

Number of total reads
280036210
Reads aligned (%)
98.0
Duplicates removed (%)
38.9
Number of peaks
19761 (qval < 1E-05)

Base call quality data from DBCLS SRA