Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HEK293T
chip antibody
input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries construction was performed using ThruPLEX DNA-seq 48D Kit (Rubicon Genomics)

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
47390098
Reads aligned (%)
98.3
Duplicates removed (%)
2.0
Number of peaks
612 (qval < 1E-05)

hg19

Number of total reads
47390098
Reads aligned (%)
97.8
Duplicates removed (%)
2.1
Number of peaks
296 (qval < 1E-05)

Base call quality data from DBCLS SRA