Antigen

Antigen Class

TFs and others

Antigen

PHF19

Cell type

Cell type Class

Prostate

Cell type

DU 145

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

ChIPseq_PHF19_SH4

cell line

DU145

cell type

Human prostate cancer cell line

chip antibody

PHF19 (Cell Signaling #77271) / Drosophila H2Av (Active Motif #61686).

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin preparation and ChIP experiments were performed with the ChIP-IT High Sensitivity Kit from Active Motif (#53040) according to the manufacturer's instructions. Libraries were prepared according to Illumina instructions.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

45725105

Reads aligned (%)

79.6

Duplicates removed (%)

24.7

Number of peaks

1447 (qval < 1E-05)

hg19

Number of total reads

45725105

Reads aligned (%)

79.2

Duplicates removed (%)

26.0

Number of peaks

1578 (qval < 1E-05)