Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
CWR22Pc
NA
NA

Attributes by original data submitter

Sample

source_name
Prostate cancer cells
cell line
CWR22PC
cell type
Prostate cancer
chip antibody
AR (Millipore, 06-680)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP library was prepared for sequencing by the SOLiD (LNCaP-AR and VCaP) or HiSeq2000 (CWR22PC) instruments according to manufacturer recommended procedures.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
26073088
Reads aligned (%)
25.9
Duplicates removed (%)
73.9
Number of peaks
13066 (qval < 1E-05)

hg38

Number of total reads
138212130
Reads aligned (%)
26.4
Duplicates removed (%)
73.4
Number of peaks
71529 (qval < 1E-05)

Base call quality data from DBCLS SRA