Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Prostate

Cell type

CWR22Pc

NA

NA

Sample

source_name

Prostate cancer cells

cell line

CWR22PC

cell type

Prostate cancer

chip antibody

none (input)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP library was prepared for sequencing by the SOLiD (LNCaP-AR and VCaP) or HiSeq2000 (CWR22PC) instruments according to manufacturer recommended procedures.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

143208822

Reads aligned (%)

99.3

Duplicates removed (%)

4.4

Number of peaks

5626 (qval < 1E-05)

hg19

Number of total reads

143208822

Reads aligned (%)

99.2

Duplicates removed (%)

4.9

Number of peaks

7573 (qval < 1E-05)