Antigen

Antigen Class

TFs and others

Antigen

TLX1

Cell type

Cell type Class

Blood

Cell type

ALL-SIL

Primary Tissue

Blood

Tissue Diagnosis

Leukemia

Sample

source_name

ALL-SIL cell line

cell line

ALL-SIL

chip antibody

anti-TLX1 (C-18 rabbit polyclonal antibody (sc-880), Santa Cruz Biotechnology)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

DNA was purified by phenol/chloroform extraction, assisted by phase lock gel tubes (5Prime). standard illumina library prep, unstranded paired end

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

42958271

Reads aligned (%)

92.5

Duplicates removed (%)

3.7

Number of peaks

13261 (qval < 1E-05)

hg19

Number of total reads

42958271

Reads aligned (%)

91.4

Duplicates removed (%)

3.9

Number of peaks

12241 (qval < 1E-05)