Antigen

Antigen Class

TFs and others

Antigen

TCF21

Cell type

Cell type Class

Cardiovascular

Cell type

Coronary artery smooth muscle

NA

NA

Sample

source_name

human coronary artery smooth muscle cells

antibody

TCF21 (HPA013189)

cell type

smooth muscle cells

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cells were lysis by 0.5% SDS and the lysates were clarified from sonicated cells and protein-DNA complexes were isolated with TCF21 antibody (HPA013189). Libraries were prepared with KAPA Hyper Prep kit (KK8502) per standrad instruction.

Sequencing Platform

instrument_model

HiSeq X Ten

hg38

Number of total reads

515297944

Reads aligned (%)

96.1

Duplicates removed (%)

86.6

Number of peaks

49668 (qval < 1E-05)

hg19

Number of total reads

515297944

Reads aligned (%)

95.2

Duplicates removed (%)

87.3

Number of peaks

44952 (qval < 1E-05)