Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Peyers Patches
NA
NA

Attributes by original data submitter

Sample

sample_type
tissue
tissue
Peyer's patch
sex
male
dev_stage
adult
age
37 year
donor ID
ENCDO845WKR
lab
Bradley Bernstein, Broad
source
Kristin Ardlie

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
data sheet: https://www.encodeproject.org/documents/c530ba5c-4343-49bc-898b-5579c287a67e/@@download/attachment/image%20to%20tissue%20mapping%20public.pdf

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
47013883
Reads aligned (%)
96.6
Duplicates removed (%)
4.3
Number of peaks
1250 (qval < 1E-05)

hg19

Number of total reads
47013883
Reads aligned (%)
95.4
Duplicates removed (%)
5.4
Number of peaks
1134 (qval < 1E-05)

Base call quality data from DBCLS SRA