Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EGR1

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
DIFFERENTIATING MONOCYTES
cell type
DIFFERENTIATING MONOCYTES
chip antibody
EGR1 BETHYL RABBIT POLICLONAL A303
treatment
differentiating CD34 into monocytes (day 14)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext ChIP-Seq ULTRAII DNA Sample Prep Kit (New England Biolabs, inc.)

Sequencing Platform

instrument_model
NextSeq 500

hg19

Number of total reads
13214930
Reads aligned (%)
178.4
Duplicates removed (%)
6.8
Number of peaks
1628 (qval < 1E-05)

hg38

Number of total reads
13214930
Reads aligned (%)
181.0
Duplicates removed (%)
6.6
Number of peaks
1683 (qval < 1E-05)

Base call quality data from DBCLS SRA