Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

Human K562 cells

tissue

Human K562 cells

streptavidin dynabeads

ThermoFisher 65602

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

For ChIP-seq analysis using the Illumina NextSeq500, 10-20 ng of ChIP DNA was processed for library generation using the NEBNext ChIP-seq Library Prep Master Mix following the manufacturer's protocol (New England Biolabs).

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

11376877

Reads aligned (%)

88.2

Duplicates removed (%)

6.5

Number of peaks

560 (qval < 1E-05)

hg19

Number of total reads

11376877

Reads aligned (%)

87.7

Duplicates removed (%)

8.4

Number of peaks

563 (qval < 1E-05)