Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC HUES64
NA
NA

Attributes by original data submitter

Sample

source_name
HUES64
cell line
HUES64
cell type
HUES64
chip antibody
NA

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
27316669
Reads aligned (%)
89.4
Duplicates removed (%)
2.7
Number of peaks
452 (qval < 1E-05)

hg19

Number of total reads
27316669
Reads aligned (%)
88.8
Duplicates removed (%)
4.2
Number of peaks
606 (qval < 1E-05)

Base call quality data from DBCLS SRA