Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
MIN6
NA
NA

Attributes by original data submitter

Sample

source_name
MIN6-4N cells
cell type
Mouse Insulinoma cells
antibody
none
sample type
input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Millipore ChIP-assay kit Illumina ChIP-Seq DNA sample preparation kit (catalog #: IP-102-1001) protocol was used

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
271583805
Reads aligned (%)
80.4
Duplicates removed (%)
33.5
Number of peaks
1122 (qval < 1E-05)

mm9

Number of total reads
271583805
Reads aligned (%)
98.1
Duplicates removed (%)
29.4
Number of peaks
32 (qval < 1E-05)

Base call quality data from DBCLS SRA