Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Epidermis

Cell type

Hair Follicle

MeSH Description

A tube-like invagination of the EPIDERMIS from which the hair shaft develops and into which SEBACEOUS GLANDS open. The hair follicle is lined by a cellular inner and outer root sheath of epidermal origin and is invested with a fibrous sheath derived from the dermis. (Stedman, 26th ed) Follicles of very long hairs extend into the subcutaneous layer of tissue under the SKIN.

Sample

source_name

Mouse hair follicle TACs

strain

CD1

cell type

Hair follicle TACs

developmental stage

p30

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Samples were prepared in accordance with previous publications (Lien et al 2011) Library was constructed in accordance with previous publications (Lien et al 2011)

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

239509065

Reads aligned (%)

89.5

Duplicates removed (%)

63.0

Number of peaks

868 (qval < 1E-05)

mm9

Number of total reads

239509065

Reads aligned (%)

89.3

Duplicates removed (%)

62.9

Number of peaks

1009 (qval < 1E-05)