Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF21

Cell type

Cell type Class
Cardiovascular
Cell type
HCASMC
NA
NA

Attributes by original data submitter

Sample

source_name
HCASMC Lonza 0000200212
cell type
coronary artery smooth muscle
chip antibody
TCF21
chip antibody manufacturer and catalog number
Abcam #ab49475, Lot No. 153899

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
15001633
Reads aligned (%)
86.5
Duplicates removed (%)
5.5
Number of peaks
2688 (qval < 1E-05)

hg38

Number of total reads
15001633
Reads aligned (%)
88.1
Duplicates removed (%)
4.5
Number of peaks
2577 (qval < 1E-05)

Base call quality data from DBCLS SRA