Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
primary T cells
treatment
none
cell type
CD4+ primary T cells
cell surface markers
CD4+ CD45RO+ CD62L+/- CD127lo CD25-
chip antibody
none (total input)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
40776182
Reads aligned (%)
99.0
Duplicates removed (%)
25.8
Number of peaks
935 (qval < 1E-05)

hg19

Number of total reads
40776182
Reads aligned (%)
98.1
Duplicates removed (%)
27.0
Number of peaks
1113 (qval < 1E-05)

Base call quality data from DBCLS SRA