Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
Eye discs
NA
NA

Attributes by original data submitter

Sample

source_name
L3 eye disc
developmental stage
L3
tissue
eye disc
chip antibody
none
replicates
2
genotype/variation
knock in IMAGO line ato:GFP

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
49107048
Reads aligned (%)
89.9
Duplicates removed (%)
32.8
Number of peaks
4350 (qval < 1E-05)

dm3

Number of total reads
49107048
Reads aligned (%)
90.3
Duplicates removed (%)
30.3
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA