Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOXL2

Cell type

Cell type Class
Kidney
Cell type
HGrC1
NA
NA

Attributes by original data submitter

Sample

source_name
HGrC1 cell-line
cell line
HGrC1
chip antibody
Goat polyclonal antibody to FOXL2 (Abcam Ab5096)
genotype/variation
HGrC1 cell-line transduced with empty vector (EV) control and stimulated with TGF

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
19019266
Reads aligned (%)
77.6
Duplicates removed (%)
20.2
Number of peaks
674 (qval < 1E-05)

hg38

Number of total reads
19019266
Reads aligned (%)
79.4
Duplicates removed (%)
18.9
Number of peaks
625 (qval < 1E-05)

Base call quality data from DBCLS SRA