Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Batf

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Spleen and peripheral lymoh organs
cell type
CD4+ T cell
strain
C57BL/6
activation
in vitro activation by TCR/Co-stimulation
antibody
Batf (PAB4003, Brookwood biomedical)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
24651148
Reads aligned (%)
96.2
Duplicates removed (%)
24.3
Number of peaks
468 (qval < 1E-05)

mm9

Number of total reads
24651148
Reads aligned (%)
95.9
Duplicates removed (%)
24.3
Number of peaks
558 (qval < 1E-05)

Base call quality data from DBCLS SRA