Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Kidney
Cell type
iSLK
NA
NA

Attributes by original data submitter

Sample

source_name
SLK cell line
hci_id
11237X3
knockdown
Rad21 KD
antibody
input

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
25057836
Reads aligned (%)
96.9
Duplicates removed (%)
2.5
Number of peaks
901 (qval < 1E-05)

hg19

Number of total reads
25057836
Reads aligned (%)
96.0
Duplicates removed (%)
3.7
Number of peaks
1057 (qval < 1E-05)

Base call quality data from DBCLS SRA