Antigen

Antigen Class

TFs and others

Antigen

ARNT

Cell type

Cell type Class

Epidermis

Cell type

SK-MEL-28

Primary Tissue

Skin

Tissue Diagnosis

Melanoma

Sample

source_name

SK-MEL-28_HIF1bChIPseq

tissue source

skin

cell line

SK-MEL-28

cell type

Melanoma cell line

treatment

0.5% O2 16h

type of sample

ChIP

chip antibody

ARNT/HIF-1β monoclonal antibody (NB100-124, Novus)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads

18129148

Reads aligned (%)

93.2

Duplicates removed (%)

25.1

Number of peaks

21464 (qval < 1E-05)

hg38

Number of total reads

18129148

Reads aligned (%)

93.7

Duplicates removed (%)

24.3

Number of peaks

21384 (qval < 1E-05)