Antigen

Antigen Class

TFs and others

Antigen

Cp190

Cell type

Cell type Class

Embryo

Cell type

Parasegment 7

NA

NA

Sample

source_name

CP190_PS7

tissue

embryo

age

5-13h

tissue subtype

parasegment 7

chip antibody

anti-CP190

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Nuclei were digested with MNase, solubilized and ChIP performed using the appropriate antibody. Libraries were prepared as described in Bowman et al., 2013.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

dm3

Number of total reads

34656544

Reads aligned (%)

78.6

Duplicates removed (%)

77.2

Number of peaks

5048 (qval < 1E-05)

dm6

Number of total reads

34656544

Reads aligned (%)

78.3

Duplicates removed (%)

77.9

Number of peaks

3325 (qval < 1E-05)