Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
LMO2

Cell type

Cell type Class
Blood
Cell type
TSU-1621MT
NA
NA

Attributes by original data submitter

Sample

source_name
TSU-1621-MT_ChIP LMO2
cell line
TSU-1621-MT
antibody target
LMO2
chip antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
46031603
Reads aligned (%)
59.6
Duplicates removed (%)
34.9
Number of peaks
18295 (qval < 1E-05)

hg38

Number of total reads
46031603
Reads aligned (%)
61.2
Duplicates removed (%)
33.8
Number of peaks
18361 (qval < 1E-05)

Base call quality data from DBCLS SRA