Antigen

Antigen Class

TFs and others

Antigen

pho

Cell type

Cell type Class

Embryo

Cell type

Embryos

NA

NA

Sample

source_name

D. Melanogaster_PHO Phdel

genotype/variation

PH del mutant

tissue

embryos

age

16-18 hrs

chip antibody

PHO

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin prepared from Drosophila embryos was immunoprecipitated with specific antibodies and precipitated DNA was isolated (see mat and methods for details) Libraries were prepared according to Illumina's instructions

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

dm3

Number of total reads

37851785

Reads aligned (%)

67.1

Duplicates removed (%)

72.6

Number of peaks

3599 (qval < 1E-05)

dm6

Number of total reads

37851785

Reads aligned (%)

65.5

Duplicates removed (%)

74.4

Number of peaks

3528 (qval < 1E-05)