Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Pc

Cell type

Cell type Class
Embryo
Cell type
4-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
D. Melanogaster_PC
genotype/variation
wild type
tissue
embryos
age
4-12 hrs
chip antibody
PC

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
3854365
Reads aligned (%)
49.7
Duplicates removed (%)
44.7
Number of peaks
1003 (qval < 1E-05)

dm6

Number of total reads
3854365
Reads aligned (%)
47.8
Duplicates removed (%)
46.3
Number of peaks
1353 (qval < 1E-05)

Base call quality data from DBCLS SRA