Antigen

Antigen Class

TFs and others

Antigen

ZBTB40

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

sample_type

cell line

sex

female

dev_stage

adult

age

53 year

donor ID

ENCDO000AAD

lab

Kevin White, UChicago

passage number

5

cell_line

K562

health state

chronic myelogenous leukemia (CML)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/33bb3ae1-9402-4274-9513-085403fe8ecc/@@download/attachment/White-Lab-K562-ChIP.pdf other: https://www.encodeproject.org/documents/d8403f5c-e846-4deb-9d16-0b7f50b07405/@@download/attachment/2016-249.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

38955914

Reads aligned (%)

95.7

Duplicates removed (%)

7.9

Number of peaks

20240 (qval < 1E-05)

hg19

Number of total reads

38955914

Reads aligned (%)

95.2

Duplicates removed (%)

8.7

Number of peaks

20036 (qval < 1E-05)