Antigen

Antigen Class

TFs and others

Antigen

EGR1

Cell type

Cell type Class

Blood

Cell type

Macrophages

MeSH Description

The relatively long-lived phagocytic cell of mammalian tissues that are derived from blood MONOCYTES. Main types are PERITONEAL MACROPHAGES; ALVEOLAR MACROPHAGES; HISTIOCYTES; KUPFFER CELLS of the liver; and OSTEOCLASTS. They may further differentiate within chronic inflammatory lesions to EPITHELIOID CELLS or may fuse to form FOREIGN BODY GIANT CELLS or LANGHANS GIANT CELLS. (from The Dictionary of Cell Biology, Lackie and Dow, 3rd ed.)

Sample

source_name

DIFFERENTIATING MACROPHAGE

cell type

DIFFERENTIATING MACROPHAGE

chip antibody

EGR1 BETHYL RABBIT POLICLONAL A303

treatment

differentiating macrophages (day 4 of GM-CSF treatment)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

NEBNext ChIP-Seq ULTRAII DNA Sample Prep Kit (New England Biolabs, inc.)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

24278820

Reads aligned (%)

96.7

Duplicates removed (%)

19.5

Number of peaks

1892 (qval < 1E-05)

hg19

Number of total reads

24278820

Reads aligned (%)

96.0

Duplicates removed (%)

19.9

Number of peaks

1737 (qval < 1E-05)