Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Neural
Cell type
Neural Stem Cells
MeSH Description
Self-renewing cells that generate the main phenotypes of the nervous system in both the embryo and adult. Neural stem cells are precursors to both NEURONS and NEUROGLIA.

Attributes by original data submitter

Sample

strain
C57BL6/N
age
3 months
sex
male
tissue
neural Stem Cells
sample_type
ChIP
Antibody
Pol2

Sequenced DNA Library

library_name
NSPC Pol2 ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
30966114
Reads aligned (%)
98.8
Duplicates removed (%)
31.8
Number of peaks
17023 (qval < 1E-05)

mm9

Number of total reads
30966114
Reads aligned (%)
98.6
Duplicates removed (%)
31.9
Number of peaks
16975 (qval < 1E-05)

Base call quality data from DBCLS SRA