SRX6720167
daf-2; SMK-1::GFP ChIP-SEQ IP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Whole worm
NA
NA

Attributes by original data submitter

Sample

strain
RIE384_2
age
Asynchronous
sex
hermaphrodite
tissue
whole animal

Sequenced DNA Library

library_name
s31_daf2_SMK-1::GFP_CHIP_IP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
10512400
Reads aligned (%)
74.0
Duplicates removed (%)
34.6
Number of peaks
631 (qval < 1E-05)

ce10

Number of total reads
10512400
Reads aligned (%)
74.0
Duplicates removed (%)
34.6
Number of peaks
634 (qval < 1E-05)

Base call quality data from DBCLS SRA