Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Embryo

Cell type

Embryos

NA

NA

Sample

source_name

input_Pol2_mixed

tissue

embryo

age

5-13h

tissue subtype

whole embryo

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Nuclei were sonicated and ChIP performed using the appropriate antibody. Libraries were prepared as described in Bowman et al., 2013.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

dm6

Number of total reads

20773684

Reads aligned (%)

95.7

Duplicates removed (%)

14.4

Number of peaks

1548 (qval < 1E-05)

dm3

Number of total reads

20773684

Reads aligned (%)

96.6

Duplicates removed (%)

12.2

Number of peaks

1617 (qval < 1E-05)