Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
fs(1)h

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
Dm_S2cell_Biotin_dBRD4-S_ChIPseq_WT_untagged_control_IP
cell line background
S2 cells
genotype/variation
wild type
knockdown or inhibitor treatment
WT
chip antibody
streptavidin T1 magnetic beads (Invitrogen 65601)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
6672268
Reads aligned (%)
91.3
Duplicates removed (%)
8.1
Number of peaks
1161 (qval < 1E-05)

dm3

Number of total reads
6672268
Reads aligned (%)
91.5
Duplicates removed (%)
7.6
Number of peaks
1123 (qval < 1E-05)

Base call quality data from DBCLS SRA