Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR3C1

Cell type

Cell type Class
Blood
Cell type
697
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
B-ALL cell line
cell line
697
protocol
ChIPmentation
agent
DEXA+KPT
antibody
GCR

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
all libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg19

Number of total reads
25482138
Reads aligned (%)
75.4
Duplicates removed (%)
21.8
Number of peaks
1078 (qval < 1E-05)

hg38

Number of total reads
25482138
Reads aligned (%)
77.5
Duplicates removed (%)
20.5
Number of peaks
1049 (qval < 1E-05)

Base call quality data from DBCLS SRA